extension shown: fhir [x]

genetics

Defined in the fhir.schema.org extension.
Canonical URL: http://schema.org/genetics

Thing > Resource > DomainResource > Observation > genetics
clinical.diagnostics > Observation > genetics

Describes how the observation resource is used to report structured genetic test results

Usage: Fewer than 10 domains
PropertyExpected TypeDescription
Properties from genetics
Observation.extension Extension Protein variant following HGVS nomenclature on the given ProteinReferenceSequenceId.
Properties from Observation
Observation.bodySite body-site Indicates the site on the subject's body where the observation was made (i.e. the target site).
Observation.category observation-category A code that classifies the general type of observation being made. This is used for searching, sorting and display purposes.
Observation.code observation-codes  or
ldlcholesterol-codes 
LDL Cholesterol -measured or calculated per code.
Observation.comments Text May include statements about significant, unexpected or unreliable. values, or information about the source of the value where this may be relevant to the interpretation of the result.
Observation.component BackboneElement Some observations have multiple component observations. These component observations are expressed as separate code value pairs that share the same attributes. Examples include systolic and diastolic component observations for blood pressure measurement and multiple component observations for genetics observations.
Observation.component.code observation-codes Describes what was observed. Sometimes this is called the observation "code".
Observation.component.dataAbsentReason observation-valueabsentreason Provides a reason why the expected value in the element Observation.value[x] is missing.
Observation.component.valueAttachment Attachment The information determined as a result of making the observation, if the information has a simple value.
Observation.component.valueCodeableConcept CodeableConcept The information determined as a result of making the observation, if the information has a simple value.
Observation.component.valuePeriod Period The information determined as a result of making the observation, if the information has a simple value.
Observation.component.valueQuantity Quantity The information determined as a result of making the observation, if the information has a simple value.
Observation.component.valueRange Range The information determined as a result of making the observation, if the information has a simple value.
Observation.component.valueRatio Ratio The information determined as a result of making the observation, if the information has a simple value.
Observation.component.valueSampledData SampledData The information determined as a result of making the observation, if the information has a simple value.
Observation.component.valuedateTime DateTime The information determined as a result of making the observation, if the information has a simple value.
Observation.component.valuestring Text The information determined as a result of making the observation, if the information has a simple value.
Observation.component.valuetime Time The information determined as a result of making the observation, if the information has a simple value.
Observation.dataAbsentReason observation-valueabsentreason Provides a reason why the expected value in the element Observation.value[x] is missing.
Observation.device DeviceMetric  or
Device 
The device used to generate the observation data.
Observation.effectivePeriod Period The time or time-period the observed value is asserted as being true. For biological subjects - e.g. human patients - this is usually called the "physiologically relevant time". This is usually either the time of the procedure or of specimen collection, but very often the source of the date/time is not known, only the date/time itself.
Observation.effectivedateTime DateTime The time or time-period the observed value is asserted as being true. For biological subjects - e.g. human patients - this is usually called the "physiologically relevant time". This is usually either the time of the procedure or of specimen collection, but very often the source of the date/time is not known, only the date/time itself.
Observation.encounter Encounter The healthcare event (e.g. a patient and healthcare provider interaction) during which this observation is made.
Observation.identifier Identifier A unique identifier for the simple observation instance.
Observation.interpretation observation-interpretation + | ++ | +++ | - | -- | ---.
Observation.issued DateTime The date and time this observation was made available to providers, typically after the results have been reviewed and verified.
Observation.method observation-methods Indicates the mechanism used to perform the observation.
Observation.performer Organization  or
RelatedPerson  or
Patient  or
Practitioner 
Who was responsible for asserting the observed value as "true".
Observation.referenceRange BackboneElement Guidance on how to interpret the value by comparison to a normal or recommended range.
Observation.referenceRange.age Range The age at which this reference range is applicable. This is a neonatal age (e.g. number of weeks at term) if the meaning says so.
Observation.referenceRange.high Quantity <3.0 mmol/L.
Observation.referenceRange.low Quantity >1.5 mmol/L.
Observation.referenceRange.meaning referencerange-meaning Range is a recommended range.
Observation.referenceRange.text Text Text based reference range in an observation which may be used when a quantitative range is not appropriate for an observation. An example would be a reference value of "Negative" or a list or table of 'normals'.
Observation.related BackboneElement A reference to another resource (usually another Observation but could also be a QuestionnaireAnswer) whose relationship is defined by the relationship type code.
Observation.related.target QuestionnaireResponse  or
Observation 
A reference to the observation or [[[QuestionnaireResponse]]] resource that is related to this observation.
Observation.related.type observation-relationshiptypes A code specifying the kind of relationship that exists with the target resource.
Observation.specimen Specimen The specimen that was used when this observation was made.
Observation.status observation-status The status of the result value.
Observation.subject Patient  or
Location  or
Device  or
Group 
The patient, or group of patients, location, or device whose characteristics (direct or indirect) are described by the observation and into whose record the observation is placed. Comments: Indirect characteristics may be those of a specimen, fetus, donor, other observer (for example a relative or EMT), or any observation made about the subject.
Observation.valueAttachment Attachment The information determined as a result of making the observation, if the information has a simple value.
Observation.valueCodeableConcept CodeableConcept The information determined as a result of making the observation, if the information has a simple value.
Observation.valuePeriod Period The information determined as a result of making the observation, if the information has a simple value.
Observation.valueQuantity Quantity Triglyceride value. If a result is not available, use the comments field.
Observation.valueRange Range The information determined as a result of making the observation, if the information has a simple value.
Observation.valueRatio Ratio The information determined as a result of making the observation, if the information has a simple value.
Observation.valueSampledData SampledData The information determined as a result of making the observation, if the information has a simple value.
Observation.valuedateTime DateTime The information determined as a result of making the observation, if the information has a simple value.
Observation.valuestring Text The information determined as a result of making the observation, if the information has a simple value.
Observation.valuetime Time The information determined as a result of making the observation, if the information has a simple value.
Properties from DomainResource
DomainResource.contained Resource These resources do not have an independent existence apart from the resource that contains them - they cannot be identified independently, and nor can they have their own independent transaction scope.
DomainResource.extension Extension May be used to represent additional information that is not part of the basic definition of the resource. In order to make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer is allowed to define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.
DomainResource.modifierExtension Extension May be used to represent additional information that is not part of the basic definition of the resource, and that modifies the understanding of the element that contains it. Usually modifier elements provide negation or qualification. In order to make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer is allowed to define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.
DomainResource.text Narrative A human-readable narrative that contains a summary of the resource, and may be used to represent the content of the resource to a human. The narrative need not encode all the structured data, but is required to contain sufficient detail to make it "clinically safe" for a human to just read the narrative. Resource definitions may define what content should be represented in the narrative to ensure clinical safety.
Properties from Resource
Resource.id Text The logical id of the resource, as used in the URL for the resource. Once assigned, this value never changes.
Resource.implicitRules Text A reference to a set of rules that were followed when the resource was constructed, and which must be understood when processing the content.
Resource.language http://tools.ietf.org/html/bcp47 The base language in which the resource is written.
Resource.meta Meta The metadata about the resource. This is content that is maintained by the infrastructure. Changes to the content may not always be associated with version changes to the resource.
Properties from Thing
additionalType URL An additional type for the item, typically used for adding more specific types from external vocabularies in microdata syntax. This is a relationship between something and a class that the thing is in. In RDFa syntax, it is better to use the native RDFa syntax - the 'typeof' attribute - for multiple types. Schema.org tools may have only weaker understanding of extra types, in particular those defined externally.
alternateName Text An alias for the item.
description Text A description of the item.
disambiguatingDescription Text A sub property of description. A short description of the item used to disambiguate from other, similar items. Information from other properties (in particular, name) may be necessary for the description to be useful for disambiguation.
image URL  or
ImageObject 
An image of the item. This can be a URL or a fully described ImageObject.
mainEntityOfPage CreativeWork  or
URL 
Indicates a page (or other CreativeWork) for which this thing is the main entity being described.

See background notes for details.
Inverse property: mainEntity.
name Text The name of the item.
potentialAction Action Indicates a potential Action, which describes an idealized action in which this thing would play an 'object' role.
sameAs URL URL of a reference Web page that unambiguously indicates the item's identity. E.g. the URL of the item's Wikipedia page, Freebase page, or official website.
url URL URL of the item.

Schema Version 2.2